BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022H03SP1|AL427962
(833 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1622 0.0
>3x_Contig1793
Length = 40499
Score = 1622 bits (813), Expect = 0.0
Identities = 824/833 (98%)
Strand = Plus / Minus
Query: 1 acacgtgaagatgtggtaccgacatcaatagcagcaactaacggaaccacctctttttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33380 acacgtgaagatgtggtaccgacatcaatagcagcaactaacggaaccacctctttttct 33321
Query: 61 gtatcggacttaataactaactctttctcartmaaawmtgcwgcaataaaagtctgctgt 120
|||||||||||||||||||||||||||||| | | | ||| ||||||||||||||||||
Sbjct: 33320 gtatcggacttaataactaactctttctcagtcatatctgctgcaataaaagtctgctgt 33261
Query: 121 tatcttgctctattccacctgatgctacgtttcattataaatwtgaatcattaataatac 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 33260 tatcttgctctattccacctgatgctacgtttcattataaatttgaatcattaataatac 33201
Query: 181 cttcttcgacctatgatacctttcgaaaaggaaacagtttatatacaagattcacaaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33200 cttcttcgacctatgatacctttcgaaaaggaaacagtttatatacaagattcacaaggg 33141
Query: 241 taataccatatgagaaactcctcttgtccacttaaaaaaaaacatatcgactcgagatgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33140 taataccatatgagaaactcctcttgtccacttaaaaaaaaacatatcgactcgagatgg 33081
Query: 301 gccatctaagatatctcttgtctagaaacttgtgaatgagtcaaaaaaaaaaaaaaawaw 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 33080 gccatctaagatatctcttgtctagaaacttgtgaatgagtcaaaaaaaaaaaaaaatat 33021
Query: 361 agaagggataccaccaaaggaacataaggttgcaagaggccgcgttgcctacaaaacgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33020 agaagggataccaccaaaggaacataaggttgcaagaggccgcgttgcctacaaaacgca 32961
Query: 421 gcagtagaaaaaggcatcaaccatactgagcaacttctttcaaaggaaactgaattctga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32960 gcagtagaaaaaggcatcaaccatactgagcaacttctttcaaaggaaactgaattctga 32901
Query: 481 atacaaaaaaggtgcataccccatataaatttttattcctcttctccattcctaggtaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32900 atacaaaaaaggtgcataccccatataaatttttattcctcttctccattcctaggtaac 32841
Query: 541 cttctttcggagaaattttttctttgccttaagcaaattgtatttagttcattctgcaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32840 cttctttcggagaaattttttctttgccttaagcaaattgtatttagttcattctgcaac 32781
Query: 601 cgctactattgtttgctataaaaataggtagtaatgtctgctggaaagattgccgttgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32780 cgctactattgtttgctataaaaataggtagtaatgtctgctggaaagattgccgttgct 32721
Query: 661 atagaatttaaatcctagccgggtcatatttcctttgaatttttcgcctttttgtgccta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32720 atagaatttaaatcctagccgggtcatatttcctttgaatttttcgcctttttgtgccta 32661
Query: 721 tttttacttgggttgtttcccaatccactttttgttatagtgtgggagaacggagaaaaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32660 tttttacttgggttgtttcccaatccactttttgttatagtgtgggagaacggagaaaaa 32601
Query: 781 taacgaacaaaagctgctagtgcagaaaatctcccagctttcgccttgagaaa 833
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 32600 taacgaacaaaagctgctagtgcagaaaatctcccagctttcgccttgagaaa 32548
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 15,718
Number of Sequences: 1807
Number of extensions: 15718
Number of successful extensions: 2188
Number of sequences better than 1.0e-20: 1
length of query: 833
length of database: 10,358,551
effective HSP length: 16
effective length of query: 817
effective length of database: 10,329,639
effective search space: 8439315063
effective search space used: 8439315063
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)